Microbiological Research by Alex Gain
Monday, May 30, 2011
Monday, May 16, 2011
Repeat Testing at beginning of Four-Pole (Country) vs End (After Southside Drainage)
Number of Blue Colonies Coliforms/dl
Beginning Sample #1 19 1900
Beginning Sample #2 20 2000
End Sample #1 39 3900
End Sample 2 36 3600
The date we have here is just the opposite of what we saw the first time we sampled from these same sites. During the first series, we saw slightly higher coliform counts in the beginning, after country systems and before south side huntington. This second time, we saw higher coliform counts after the south side and lower counts after the country systems vs. after south side. Another difference is that there were significantly higher coliform counts when counting the sum of both before and after in this last experiment. This is probably because the creek was higher, following heavy rain the day before, which seems to lead to a "catching" of leachate from septic tanks in the country and possibly broken sewer lines on the south side. We will need to repeat these sites once more and try to arrive at some conclusions from the data.
Tuesday, May 3, 2011
Study of Fecal Levels from Upstream 4-Pole (septic tanks) vs. Southside Huntington
The purpose of this study was to determine fecal coliform levels in 4-Pole after the stream has gone through
rural areas which have septic tank sewage treatment (or no treatment) and then measure the same thing as the stream flows through Ritter Park, which drains areas on the south side of Huntington, in which sewage treatment is in place. We took two replicate samples from 4-Pole across from the foot of HHS hill. This represented the rural systems. We then took two replicate samples from the stream at the end of Ritter Park, after it had flowed through the south side. We need to find out: 1. Do the rural systems leak greater or lesser levels of fecal coliforms than the area served by the city system. 2. Are the fecal coliform levels we have gotten previously (thousands/dl) in the south side city area the result of drain pipes containing sewage leakage into 4-Pole or just the accumulation from the rural systems upstream plus sewage leakage from the south side.
Results:
Samples # Blue Colonies Fecal Coliforms/deciliter
0.1ml 1ml 5ml
B1 0 7 36 720
B2 1 7 27 540
E1 0 2 14 280
E2 0 1 22 440
Where B1 and B2 are replicate samples from a site (Below HHS) representing the effect of rural coliform leakage, and E1 and E2, which were taken after the creek has flowed through the south side of Huntington.
rural areas which have septic tank sewage treatment (or no treatment) and then measure the same thing as the stream flows through Ritter Park, which drains areas on the south side of Huntington, in which sewage treatment is in place. We took two replicate samples from 4-Pole across from the foot of HHS hill. This represented the rural systems. We then took two replicate samples from the stream at the end of Ritter Park, after it had flowed through the south side. We need to find out: 1. Do the rural systems leak greater or lesser levels of fecal coliforms than the area served by the city system. 2. Are the fecal coliform levels we have gotten previously (thousands/dl) in the south side city area the result of drain pipes containing sewage leakage into 4-Pole or just the accumulation from the rural systems upstream plus sewage leakage from the south side.
Results:
Samples # Blue Colonies Fecal Coliforms/deciliter
0.1ml 1ml 5ml
B1 0 7 36 720
B2 1 7 27 540
E1 0 2 14 280
E2 0 1 22 440
Where B1 and B2 are replicate samples from a site (Below HHS) representing the effect of rural coliform leakage, and E1 and E2, which were taken after the creek has flowed through the south side of Huntington.
Sunday, April 17, 2011
Conclusions From Data Obtained from Area 8
The earlier work was done for practice in getting familiar with techniques, and that site was below the tennis courts (see maps representing 2 different days of anayses). Site 8 was considered as an actual testing site.
Site 8 consists of ~80 meters of 4-Pole Creek including 3 drain pipes, beginning below the Rose Garden and ending at the 8th street bridge. Since my original objective was to test for and quantify fecal contamination as a health issue, I was interested in the fecal levels in the creek itself and in the effluent flowing into the creek from drain pipes. I was also interested in any impact from drain pipe effluent on coliform levels downstream. I was told that the EPA has an interest in impacts such as this also. From the creek itself, I got coliform levels in the thousands per deciliter. The levels from samples taken upsteam from all the pipes were about the same as those below the pipes (samples taken under the bridge), so we concluded that the pipe C, the only one of the pipes that had coliforms, did not cause downstream levels of coliforms to be any higher than site #1 (upstream), and therefore had a low level of negative impact. I have shown proof via biochemical tests (see photos of these tests in the blog) that both in the creek and in effluent from pipe C, that Escherichia coli was present among the coliforms counted on my plates. This proves that the coliforms I detected are fecal since Escherichia coli is found only in feces, and not in the environment. As I have mentioned earlier, I used Fmc medium in all of the testing, because it selects out gram negative bacteria only, and only lactose fermenters will be blue on this medium, and those will be the coliforms which I counted.
Drain pipes:
We labeled the 3 drain pipes A, B, and C (see map of site 8). We got 0 coliforms from both A or B from 2 different test times. We didn't test them further because they did not present a health problem. We noticed 2 things about pipes A and B, though. One is that they drained briefly when it rained, and stopped draining soon after the rain stopped. We theorized that they drained the surface water from 8th street and not any underground sources, because of the short duration of effluent. Also, when I accidentally left the sampling plates at ambient instead of 44.5C, we noticed very high levels of environmental bacteria, which are found mostly in the top levels of soil, and deeper soils such as deeper drainage systems have few or no bacteria from the soil itself.
Pipe C was the most important focus of my testing. It ran all the time, ranging from about 1 or 2 liters/min. to something over 10 liters/min. It was hard to determine because I wasn't allowed to sample during flood stage because of the danger of falling in and being carried away. Even during normal levels, I had to crawl down to the outlet of Pie C as you can see in the photo for April 5 on the blog site.
We found 2 important things about Pipe C. One was that the effluent from it contained coliforms in significant levels. We tested it again and again under different weather conditions, because sometimes we got coliform levels lower than he creek itself, and occasionally we got higher levels. Also, sometimes we saw a lot of detergent foam (white), but not every day, more like every few days. We theorized that either pipe C drained surface water and the detergent was from someone washing his car, or pipe C represents underground storm drainage and then picks up effluent from broken sewer lines. This latter theory is more likely since it contains significant levels of coliforms, and it drains constantly, instead of just when it rains.
In terms of the health hazard issue, wherever coliforms are found there is the danger of the spread of fecal-oral diseases, as I mentioned early in this blog. There are several bacterial, parasitic, and viral diseases spread this way, and they are all serious and sometimes fatal, but I have found during this work that fecal contamination is almost everywhere. So, where do you draw the line as to what represents a dangerous situation vs. a tolerable one. I have learned also during this work that the "lines" that are drawn vary a lot. Drinking water shall contain 0 coliforms to be safe. Public swimming areas (non-chlorinated) are temporarily shut down when possibly 300 cfu's coliforms per deciliter are found, or maybe 100/dl, depending on health dept. recommendations, or state regulations vs. federal regs. such as state parks vs. national parks. No one knows all the 'right" answers on this issue.
Next Site:
Since I have one third of the semester left to work, I would like to do another project on Four Pole. I see a couple of possibilities:
1. A large drain empties into 4-Pole a few feet upstream from the bridge to the tennis court area. It always has a strong flow, and it would be interesting to see if it contributes fecal coliforms, and if so at what level. Also what impact would it have as the stream continues through the park.
2. Measure influence of totality of drains from country homes a half mile or more upstream to see what fecal levels occur there vs the levels as the stream travels through the park and picks up fecal contamination as we have seen from Pipe C at area 8.
Site 8 consists of ~80 meters of 4-Pole Creek including 3 drain pipes, beginning below the Rose Garden and ending at the 8th street bridge. Since my original objective was to test for and quantify fecal contamination as a health issue, I was interested in the fecal levels in the creek itself and in the effluent flowing into the creek from drain pipes. I was also interested in any impact from drain pipe effluent on coliform levels downstream. I was told that the EPA has an interest in impacts such as this also. From the creek itself, I got coliform levels in the thousands per deciliter. The levels from samples taken upsteam from all the pipes were about the same as those below the pipes (samples taken under the bridge), so we concluded that the pipe C, the only one of the pipes that had coliforms, did not cause downstream levels of coliforms to be any higher than site #1 (upstream), and therefore had a low level of negative impact. I have shown proof via biochemical tests (see photos of these tests in the blog) that both in the creek and in effluent from pipe C, that Escherichia coli was present among the coliforms counted on my plates. This proves that the coliforms I detected are fecal since Escherichia coli is found only in feces, and not in the environment. As I have mentioned earlier, I used Fmc medium in all of the testing, because it selects out gram negative bacteria only, and only lactose fermenters will be blue on this medium, and those will be the coliforms which I counted.
Drain pipes:
We labeled the 3 drain pipes A, B, and C (see map of site 8). We got 0 coliforms from both A or B from 2 different test times. We didn't test them further because they did not present a health problem. We noticed 2 things about pipes A and B, though. One is that they drained briefly when it rained, and stopped draining soon after the rain stopped. We theorized that they drained the surface water from 8th street and not any underground sources, because of the short duration of effluent. Also, when I accidentally left the sampling plates at ambient instead of 44.5C, we noticed very high levels of environmental bacteria, which are found mostly in the top levels of soil, and deeper soils such as deeper drainage systems have few or no bacteria from the soil itself.
Pipe C was the most important focus of my testing. It ran all the time, ranging from about 1 or 2 liters/min. to something over 10 liters/min. It was hard to determine because I wasn't allowed to sample during flood stage because of the danger of falling in and being carried away. Even during normal levels, I had to crawl down to the outlet of Pie C as you can see in the photo for April 5 on the blog site.
We found 2 important things about Pipe C. One was that the effluent from it contained coliforms in significant levels. We tested it again and again under different weather conditions, because sometimes we got coliform levels lower than he creek itself, and occasionally we got higher levels. Also, sometimes we saw a lot of detergent foam (white), but not every day, more like every few days. We theorized that either pipe C drained surface water and the detergent was from someone washing his car, or pipe C represents underground storm drainage and then picks up effluent from broken sewer lines. This latter theory is more likely since it contains significant levels of coliforms, and it drains constantly, instead of just when it rains.
In terms of the health hazard issue, wherever coliforms are found there is the danger of the spread of fecal-oral diseases, as I mentioned early in this blog. There are several bacterial, parasitic, and viral diseases spread this way, and they are all serious and sometimes fatal, but I have found during this work that fecal contamination is almost everywhere. So, where do you draw the line as to what represents a dangerous situation vs. a tolerable one. I have learned also during this work that the "lines" that are drawn vary a lot. Drinking water shall contain 0 coliforms to be safe. Public swimming areas (non-chlorinated) are temporarily shut down when possibly 300 cfu's coliforms per deciliter are found, or maybe 100/dl, depending on health dept. recommendations, or state regulations vs. federal regs. such as state parks vs. national parks. No one knows all the 'right" answers on this issue.
Next Site:
Since I have one third of the semester left to work, I would like to do another project on Four Pole. I see a couple of possibilities:
1. A large drain empties into 4-Pole a few feet upstream from the bridge to the tennis court area. It always has a strong flow, and it would be interesting to see if it contributes fecal coliforms, and if so at what level. Also what impact would it have as the stream continues through the park.
2. Measure influence of totality of drains from country homes a half mile or more upstream to see what fecal levels occur there vs the levels as the stream travels through the park and picks up fecal contamination as we have seen from Pipe C at area 8.
Last Sampling of Location 8, Site #5 (Under 8th Street Bridge During Flood Stage)
These pictures were taken on 4/16/2011, when the creek was at it's highest since this study began. The things of interest are:
1. The effluent in pipes A and B is very slight in the case of A, and no effluent at all from pipe B, in spite of the fact that the rain had just stopped a couple of hours ago. We concluded that the drainage from those pipes was from surface run-off, especially since the environmental bacteria were so high, indicating that the drainage is through surface soil, which has much higher levels of bacteria. There were no coliforms from the effluent from these pipes, when we tested them a few weeks ago, therefore we haven't paid much attention to pipes A and B.
2. We also tested the water from the creek itself once more to see if it still contains somewhat high coliform counts. The photo of the Fmc plate with 0.1ml sample is shown above with only 3 colonies, which to get deciliters would be multiplied by 1000 to give 3000 cfu's coliforms/dl. The low number makes it an estimate, but it is similar to the levels we have gotten before for flood like conditions, apparantly from the high creek levels catching leaky sewage pipes and failed septic tanks out in the country.
We see no reason to test further at Site 8, since we have repeated our testing under different weather conditions and have consistent data on repeats of these different conditions. We have shown that fecal contamination is present in the creek itself, it is higher during high creek levels, and Pipe C apparently picks up fecal contamination, possibly by catching sewage from broken sewer lines, further up the hill from the creek, and empties it into the creek. The impact is not very great though, since coliform levels downstream from the Pipe C are close in number to numbers at oursite #1, which is upstream from all the pipes. .
Tuesday, April 5, 2011
Proof of Escherichia coli presence from Pipe "C"
This is me sampling from Pipe "C"
Early in my blog I tested 4 of the colonies (blue colonies on Fmc) in biochemical tests which determine what species of coliform you have in the samples. These samples were taken from the creek itself (not Pipe "C"). One of the colonies was definitely E.c. and probably the other 3 had E.c. present but they were contaminated with other coliforms, but the test still shows that these coliforms are from fecal material in the creek, since E.c. was among them, and that species isn't found anywhere else in nature except feces. I had to do the same thing with Pipe "C" effluent, so I passed 1.0ml, and 10ml volumes of my sample, collected on Sunday, April 3, through membrane filters, and placed the filters on Fmc plates, which were incubated at 44.5 C. 10ml gave TNTC, 1ml gave too many also, and the blue dye was broken down, but there were some isolated colonies at the edge of the plate, which I inoculated one of them into Lactose Fermentation (first Tube), Sulfide, Indole, and Motility (second tube), and Citrate (third tube). I had to add Kovacs reagent to the SIM tube. The results below show + lactose, + indole, and negative citrate - showing that the colony was Escherichia coli:
Tuesday, March 22, 2011
Repeat Testing on Pipe "C" at Site #8 - March 19, 2011
4-Pole Creek at moderate level of 1.5 to 2', turbid water. Only Site #5 (under bridge) was tested along with Pipe "C", because at overall site #8, the site #1 (upstream control) has been nearly identical with the downstream site #5 (under bridge). The object in this experiment was to continue to track the coliforms from Pipe "C" because the numbers seem to be inconsistent. On some days they are lower than the creek itself, and more recently, they are significantly higher. There is also the inconsistent appearance of suds. When these samples were collected (early in the day) there was abundant suds, similar to one of the previous test days. We didn't have the camera when we took the samples, and the picture shown here was taken later in the day, and there were no suds at that time.
# colonies Coliforms/dl
Pipe "C" 1ml 4 (blue) (400)
Pipe "C" 10ml TNTC - blue dye N/A
destroyed by TNTC,
can't estimate
Site # 5 1ml 2 (blue) (200)
Site # 5 10ml 55 550
We can conclude that the Pipe C has more coliform cfu's than the stream itself on this date, but our numbers on the Pipe C, 1ml and Site # 5, 1ml have statistically inaccurate #'s of colonies (4 and 2 respectively).
The numbers of colonies on the 10ml analyses are much higher for Pipe C, but the blue dye was destroyed by there being too many colonies. All we can say is that the coliform counts in Pipe C were much higher than in the creek itself.
# colonies Coliforms/dl
Pipe "C" 1ml 4 (blue) (400)
Pipe "C" 10ml TNTC - blue dye N/A
destroyed by TNTC,
can't estimate
Site # 5 1ml 2 (blue) (200)
Site # 5 10ml 55 550
We can conclude that the Pipe C has more coliform cfu's than the stream itself on this date, but our numbers on the Pipe C, 1ml and Site # 5, 1ml have statistically inaccurate #'s of colonies (4 and 2 respectively).
The numbers of colonies on the 10ml analyses are much higher for Pipe C, but the blue dye was destroyed by there being too many colonies. All we can say is that the coliform counts in Pipe C were much higher than in the creek itself.
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